PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1192300.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 25915.9 Da PI: 5.3401 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.6e-19 | 35 | 83 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++ a+++l+g Pd.00g1192300.m02 35 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 83 8*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MRIVEEARVV LQGFTEARCQ YGVLLGPTAG QEIRFRGVRK RPWGRFAAEI RDPWKKTRVW 60 LGTFDSAEDA ARAYDTAARS LRGPKAKTNF PPSTSAADYD INNNHRLPPH HPSLYDDDAV 120 CDVVQASRPT SSSLSSTVES FSGPRPQPRP TSDAQLQRRP VNPVPPDDCH SDCDSSSSVV 180 DDGDDCVMTS SFRRVSPLPF DLNLPPPPMM DGLDLFKSGE VYGDDHDLQA TALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 2e-25 | ERF family protein |