PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1192300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23529.1 Da PI: 5.6328 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.3e-19 | 13 | 61 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++ a+++l+g Pd.00g1192300.m01 13 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDTAARSLRG 61 8*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVFRPTAGQE IRFRGVRKRP WGRFAAEIRD PWKKTRVWLG TFDSAEDAAR AYDTAARSLR 60 GPKAKTNFPP STSAADYDIN NNHRLPPHHP SLYDDDAVCD VVQASRPTSS SLSSTVESFS 120 GPRPQPRPTS DAQLQRRPVN PVPPDDCHSD CDSSSSVVDD GDDCVMTSSF RRVSPLPFDL 180 NLPPPPMMDG LDLFKSGEVY GDDHDLQATA LCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 2e-25 | ERF family protein |