PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1191760.m03
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 355aa    MW: 39995.1 Da    PI: 8.4584
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1191760.m03genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS429.91.9e-131234924374
               GRAS  24 LarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHii 115
                        + +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e +   sse l+++++++ev+P++kf+++ aN aI ea++ e+rvHii
  Pd.00g1191760.m03   2 MDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPA---SSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDENRVHII 90 
                        789*******************************************9...9***************************************** PP

               GRAS 116 DfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVn 205
                        Df+i+qG QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g+rL+k+Ae ++vpfef++ +a +  +++l++L v+pgEala n
  Pd.00g1191760.m03  91 DFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLNIVGKRLSKLAELFKVPFEFHA-AAMSGCEVQLKHLGVRPGEALAMN 181
                        **********************************888789999************************.89999******************* PP

               GRAS 206 lvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                        ++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++lpr+++eri+vE+++l+re+vn+
  Pd.00g1191760.m03 182 FAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVTLPRDHKERINVEQHCLAREVVNI 273
                        ******************************************************************************************** PP

               GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        +aceg er+erhe l+kWr r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l+lgWk+r Lv+ +aW+
  Pd.00g1191760.m03 274 IACEGVERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSD-KYRLQERDGALYLGWKNRDLVASCAWK 349
                        ************************************************5.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MMDELRQMVS VSGEPIQRLG AYLLEGLVAR RASSGSNIYK ALRCKEPASS ELLSYMHILY  60
EVCPYFKFGY MSANGAIAEA MKDENRVHII DFQIGQGSQW LTLIQAFAAR PGGPPHIRIT  120
GIDDSMSAYA RGGGLNIVGK RLSKLAELFK VPFEFHAAAM SGCEVQLKHL GVRPGEALAM  180
NFAFMLHHMP DESVSTQNHR DRLLRLVKSL SPKVVTLVEQ ESNTNTAAFF PRFVETLNYY  240
TAMFESIDVT LPRDHKERIN VEQHCLAREV VNIIACEGVE RVERHELLGK WRLRFAMAGF  300
TPYPLSSLVN ATIKTLLDNY SDKYRLQERD GALYLGWKNR DLVASCAWKC KPSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein