PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1191760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 385aa    MW: 43383.1 Da    PI: 8.3795
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1191760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS453.61.2e-13893791374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l+++L+ cA+av+++dl laq+++ +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e +   sse l+++++++ev+P++k
  Pd.00g1191760.m01   9 LKQVLIFCAKAVADNDLLLAQWMMDELRQMVSVSGEPIQRLGAYLLEGLVARRASSGSNIYKALRCKEPA---SSELLSYMHILYEVCPYFK 97 
                        5799*****************************************************************9...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        f+++ aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg++++ s   +   l+ +g+rL+k+Ae ++vpfef++ +
  Pd.00g1191760.m01  98 FGYMSANGAIAEAMKDENRVHIIDFQIGQGSQWLTLIQAFAARPGGPPHIRITGIDDSMSAyaRGGGLNIVGKRLSKLAELFKVPFEFHA-A 188
                        *********************************************************888789999************************.8 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        a +  +++l++L v+pgEala n++++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rf+e+l+yy+a+f+s++++
  Pd.00g1191760.m01 189 AMSGCEVQLKHLGVRPGEALAMNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFVETLNYYTAMFESIDVT 280
                        9999**************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lpr+++eri+vE+++l+re+vn++aceg er+erhe l+kWr r+ +aGF+p+pls+ +++++k+ll ++++  yr++e++g+l+lgWk+r 
  Pd.00g1191760.m01 281 LPRDHKERINVEQHCLAREVVNIIACEGVERVERHELLGKWRLRFAMAGFTPYPLSSLVNATIKTLLDNYSD-KYRLQERDGALYLGWKNRD 371
                        ***********************************************************************5.5****************** PP

               GRAS 367 LvsvSaWr 374
                        Lv+ +aW+
  Pd.00g1191760.m01 372 LVASCAWK 379
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MDSISKRDLK QVLIFCAKAV ADNDLLLAQW MMDELRQMVS VSGEPIQRLG AYLLEGLVAR  60
RASSGSNIYK ALRCKEPASS ELLSYMHILY EVCPYFKFGY MSANGAIAEA MKDENRVHII  120
DFQIGQGSQW LTLIQAFAAR PGGPPHIRIT GIDDSMSAYA RGGGLNIVGK RLSKLAELFK  180
VPFEFHAAAM SGCEVQLKHL GVRPGEALAM NFAFMLHHMP DESVSTQNHR DRLLRLVKSL  240
SPKVVTLVEQ ESNTNTAAFF PRFVETLNYY TAMFESIDVT LPRDHKERIN VEQHCLAREV  300
VNIIACEGVE RVERHELLGK WRLRFAMAGF TPYPLSSLVN ATIKTLLDNY SDKYRLQERD  360
GALYLGWKNR DLVASCAWKC KPSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein