PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1187150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 449aa MW: 48382.3 Da PI: 7.3263

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1187150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96	2.5e-30	195	253	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+ Pd.00g1187150.m01 195 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 253 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MTSLQVELER LHEENGELKT MLDQMTKSYS QLQAQLLIAM QKQAQNRLRE PIKCEANGML 60 ARQFMDPRPS AAAAIDHVRD PSVAYSSGKT PADHEAFSSF APSNLNIEVM STERDQYQRR 120 LQTNINCAEE ALDRSSQCLG SPNYTSKSSD PNLFDDDNDE PKRSTDQEQV PVADQIPFRK 180 ARVSVRARSE APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMASGCPVRK QVQRLAEDKT 240 ILITTYEGNH SHPLPPAATA MANTTSAAAA MLLSASAPFP TITLDLTQSP MQQFHRIPPP 300 SSSTFPLPLH GYHQLMGGPG HPIPGPTYFP PNYKAPPPPA GVSLGGQRST STHASGMIET 360 VSAAIASDPN FTAALAEAIS TIMGAPRPHQ GHQGGININD GDIANNNAAR GLVASTNNSP 420 PSANIGLPPG SLQPGSPQLP QSCTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MTSLQVELER LHEENGELKT MLDQMTKSYS QLQAQLLIAM QKQAQNRLRE PIKCEANGML  60
ARQFMDPRPS AAAAIDHVRD PSVAYSSGKT PADHEAFSSF APSNLNIEVM STERDQYQRR  120
LQTNINCAEE ALDRSSQCLG SPNYTSKSSD PNLFDDDNDE PKRSTDQEQV PVADQIPFRK  180
ARVSVRARSE APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMASGCPVRK QVQRLAEDKT  240
ILITTYEGNH SHPLPPAATA MANTTSAAAA MLLSASAPFP TITLDLTQSP MQQFHRIPPP  300
SSSTFPLPLH GYHQLMGGPG HPIPGPTYFP PNYKAPPPPA GVSLGGQRST STHASGMIET  360
VSAAIASDPN FTAALAEAIS TIMGAPRPHQ GHQGGININD GDIANNNAAR GLVASTNNSP  420
PSANIGLPPG SLQPGSPQLP QSCTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	8e-56	WRKY family protein