PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1186040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 356aa    MW: 39978.2 Da    PI: 5.2297
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1186040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.26.9e-28130190259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        +Dg++WrKYGqK++ g+++prsYYrCt++   +C ++k+v+rs+edp+++eitY+g+H+++
  Pd.00g1186040.m01 130 EDGHSWRKYGQKDILGTKHPRSYYRCTYRntqSCYATKQVQRSDEDPTIFEITYKGKHTCS 190
                        8***************************98889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDSSKSWEHK SLLTEIMEGM ELAKQLRLSL SAASSSDTRQ FLVQRILSSY EKALLILNFS  60
GPDQSTAGAI ASVPESLVSA NAGPCFDDYN KSPKDHHDLT DVSNKRKIMD KWTDHVMRVS  120
SENGIEGPHE DGHSWRKYGQ KDILGTKHPR SYYRCTYRNT QSCYATKQVQ RSDEDPTIFE  180
ITYKGKHTCS HGSNSVLPPP SPEQQEQKRN KQNNTSHQQQ SQGNQMSFPT NLRVDTKLLE  240
DRENMASPFS FTSTSFGCMM PDDAFLSSML DDNNTFFDNF NHSLLSPAAG ESNYYLMPPS  300
QMRNIAGNEQ LSECGHTEII SANNSSTNSP IPDMDFPLEP VEIEPNFPFD TTGIFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.15e-55WRKY family protein