PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1185940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 288aa    MW: 32154.2 Da    PI: 8.8194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1185940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19112162256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Pd.00g1185940.m01 112 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 162
                        59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDTMQDSKLA FGFSDTIDIR SSLSNLILTS NTNTLDSIFS HCPQTLSTTT SNNSSVSEPL  60
GSSVYLHQRD LLQKFSDESR ANAAVSRFFQ KNPVQSSACS STTYMAPCKK KLYRGVRQRH  120
WGKWVAEIRL PQNRMRVWLG TYDTAEAAAY AYDRAAYKLR GEYARLNFPN LKDPSKMGFG  180
DCARLNAVKT SVDAKIQAIC QKVKRERAKK NAKKSSNSSE NEKAVMKVDS SPSSSGFGDD  240
GVWRCENSPP SISTEWPMGM AEDLEFEGCS LARMPSYDPE LIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-42ERF family protein