PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1183040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 332aa    MW: 36560.7 Da    PI: 5.1744
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1183040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.82.4e-33113167155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        +pr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl
  Pd.00g1183040.m01 113 RPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 167
                        59****************************************************8 PP
2Myb_DNA-binding54.52.8e-17115166148
                        TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                        r+rWT+e++e++v+av++l g    t+k + + m+ +g+t +++ks++qky+
  Pd.00g1183040.m01 115 RMRWTPELHERFVEAVNKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 166
                        89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MSNQYDDEQS EDLMKDFLNL HGDGSHGSFH GISCGSDTLA LTEQLELQFL SDQLDMAITD  60
NGENPGLDEI YEIPQASPKP SIGLTCSKSC QLTTPPVDAL SSHPSPGPSP AHRPRMRWTP  120
ELHERFVEAV NKLDGAEKAT PKGVLKVMNV EGLTIYHVKS HLQKYRLAKY MPEKREDKKA  180
SSSEEKKAAS SSSESDGRRK GSIQITEALR MQMEVQKQLH EQLEVQRALQ LRIEDHAKYL  240
QKILEEQQKA GSALLSPQAL SSLATNSIQE PEQQPSSSAG VSPTQPAESD SSSPLSLKHK  300
ATDSSESEPP ACSKKQRLEE KPDEGVVENP QQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.12e-89G2-like family protein