PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1180630.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 464aa MW: 51284.3 Da PI: 4.5409 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85.9 | 3.1e-27 | 142 | 207 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g1180630.m02 142 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6789******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 464 aa Download sequence |
MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY 60 VKPSLKRKSD AADYEAESSD RTAAPGYTEA VTSPLQTPVS SKVGKANKTS RLTKCSRSGP 120 QTPASNVGSP SGANLTPAGP CRFDSSLGLL TKKFINLIKH AEDGILDLNN AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRTGDVDENY PSLQAQVENL SDEERRLDQQ 240 IREMQERLRD LSEDESNKKW LFVTEEDIKG LPCLQNETLI AIKAPHGTTL EVPDPDEAVD 300 YPQRRYRMVL RSTMGPIDVY LVSQFEEKFE EINGVEVPTD IPSSSGVNEN PATTMVTENR 360 GKDVEIQGPD DHRMCADPTA SQDIMSGMMK IVPSDVDSDA DYWLLSDDAD ISITDMWRTE 420 PGVVWNELGA IDEDYPMVNV STPRPQTPPS SSTQVPATAN RTKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-154 | E2F/DP family protein |