PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1180630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 465aa MW: 51412.4 Da PI: 4.5409

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1180630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	143	208	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Pd.00g1180630.m01 143 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 208 6789****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY 60 VKPSQLKRKS DAADYEAESS DRTAAPGYTE AVTSPLQTPV SSKVGKANKT SRLTKCSRSG 120 PQTPASNVGS PSGANLTPAG PCRFDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK 180 RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRTGDVDEN YPSLQAQVEN LSDEERRLDQ 240 QIREMQERLR DLSEDESNKK WLFVTEEDIK GLPCLQNETL IAIKAPHGTT LEVPDPDEAV 300 DYPQRRYRMV LRSTMGPIDV YLVSQFEEKF EEINGVEVPT DIPSSSGVNE NPATTMVTEN 360 RGKDVEIQGP DDHRMCADPT ASQDIMSGMM KIVPSDVDSD ADYWLLSDDA DISITDMWRT 420 EPGVVWNELG AIDEDYPMVN VSTPRPQTPP SSSTQVPATA NRTKT

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSGSRAHDPP AQPPQPIMQQ ALKRQLAFSS MKPPFSATAD YHGFVPDPRQ LTDSEAYGIY  60
VKPSQLKRKS DAADYEAESS DRTAAPGYTE AVTSPLQTPV SSKVGKANKT SRLTKCSRSG  120
PQTPASNVGS PSGANLTPAG PCRFDSSLGL LTKKFINLIK HAEDGILDLN NAADTLEVQK  180
RRIYDITNVL EGIGLIEKKL KNRIQWKGLD VSRTGDVDEN YPSLQAQVEN LSDEERRLDQ  240
QIREMQERLR DLSEDESNKK WLFVTEEDIK GLPCLQNETL IAIKAPHGTT LEVPDPDEAV  300
DYPQRRYRMV LRSTMGPIDV YLVSQFEEKF EEINGVEVPT DIPSSSGVNE NPATTMVTEN  360
RGKDVEIQGP DDHRMCADPT ASQDIMSGMM KIVPSDVDSD ADYWLLSDDA DISITDMWRT  420
EPGVVWNELG AIDEDYPMVN VSTPRPQTPP SSSTQVPATA NRTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-153	E2F/DP family protein