PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1179010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 87aa MW: 10363.9 Da PI: 10.4511 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.3 | 1.7e-18 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell ++++q+G g W+ ++ + g++R++k+c++rw++yl Pd.00g1179010.m01 11 KGAWTGEEDELLRQYIQQHGEGKWHQVSLKAGLNRCRKSCRLRWLNYL 58 79*********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
MEGNNLLRVR KGAWTGEEDE LLRQYIQQHG EGKWHQVSLK AGLNRCRKSC RLRWLNYLRP 60 NIRTGDFTED EVDLMVRLRK LLGNRQV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-35 | MYB family protein |