PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1178980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 28876.9 Da PI: 7.4752 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 7.9e-16 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++ +G g W+ ++ + g++R++k+c++rw++yl Pd.00g1178980.m01 12 KGAWTKEEDDLLRLFIQNHGEGKWNQVSLHSGLKRCRKSCRLRWLNYL 59 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44 | 5e-14 | 65 | 108 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g1178980.m01 65 RGHFAEDEIDLILRLHKLLGNR-WSLIAGRLP-GRTANDVKNFWNT 108 678899****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MYEMDSSLGV RKGAWTKEED DLLRLFIQNH GEGKWNQVSL HSGLKRCRKS CRLRWLNYLK 60 PSIKRGHFAE DEIDLILRLH KLLGNRWSLI AGRLPGRTAN DVKNFWNTRL GIKMVSVVVE 120 KVKEKSPETK KDIAVRPQSR RLSKTSHYLS GHKTVTSRHN QPEENFSKLP ILPSSPIEDE 180 VDWWETLLED EDNVQRTKCS CLLLEEDHFT NCCVEDFAQW TITDFRYLED CPCWIGSSDM 240 DLWNLST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 3e-53 | MYB family protein |