PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g117610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 270aa    MW: 29009.1 Da    PI: 6.2388
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g117610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-1859108255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  Pd.00g117610.m01  59 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 108
                       59****999.**********954...5**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEDEHPLSPP AAPPHHPPQD NDKNNKSPDS TTASTATTPT ETNSKKCKGK GGPDNNKFRY  60
RGVRQRSWGK WVAEIREPRK RTRKWLGTFA TAEDAARAYD RAAIILYGSR AQLNLQPSGF  120
GLTLPFPSPA HPVPLMASGF VPYGVGVGVY PSVAAAATSS YPVSDGGGGD TSTSYLNPNP  180
SRDQYQELLH HNQNNQADSC SFNDGNSIMG SGLSLSSSQP MPVAPGCSDP MSGVGPMSPL  240
MWPLTSEEEC APSLWDYGDP FFLDFKGFDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-30ERF family protein