PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1174910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 94aa MW: 10709 Da PI: 8.5173 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.8 | 3.9e-08 | 22 | 61 | 15 | 54 |
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +i + ++L++llP+ + + +s K+s + +L+++++YIk+L Pd.00g1174910.m01 22 QITDLVSKLQQLLPEiR-NRRSDKVSASKVLQETCNYIKNL 61 7889999********77.89*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
MSSRRSSRSR QSGTSRNISD EQITDLVSKL QQLLPEIRNR RSDKVSASKV LQETCNYIKN 60 LHREVDDLSD RLSELLASTD MDSDQAAIIR SLLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 6e-40 | bHLH family protein |