PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1174740.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 602aa MW: 65603.2 Da PI: 6.296

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1174740.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.8e-30	277	336	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Pd.00g1174740.m02 277 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 336 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK GGHGWLAEPE 60 QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI VRNYQSLQMH 120 FHGLLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR KDEQMKKTSH 180 FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVFMKN SSSDNSCGDP KEDDPTKLWP 240 PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY 300 YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA AASMLQSYSS 360 TSQQGHTAMV PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS HPTVTLDLTA 420 PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN NHTAAGYLNY 480 GNRLMLTETI ASATKAITSN PKFQSALAAA LTSFVGTNNG GGATTGPNLQ PTFPTPSEPS 540 QPSYATSLSC WGGRDGEWMV SHAADWGRLI QEGQRRNSDD VVGFGFTLSE PHELSEAGHV 600 AS

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MEMPKRRSKA MENNNTEENS FLGNTPVEDK TKKSDGHDEE GTSMEMEISK GGHGWLAEPE  60
QTNTLMPSSS AGKDRALIKH PQEDELQSAK AEMGEVKEEN ERLKLLLSRI VRNYQSLQMH  120
FHGLLQKDEE AKKSMDPSSS ARDQSNEQDE EADELVSLSL GRSSSTDQPR KDEQMKKTSH  180
FSKNGKGDDE EGLNGAGLAL ELGCRFEPAA DQSTEVFMKN SSSDNSCGDP KEDDPTKLWP  240
PSKTSKTTRS GDDEVSQQTH LKKARVSVRA RCDAPTMNDG CQWRKYGQKI AKGNPCPRAY  300
YRCTVSPSCP VRKQVQRCAD DMSILITTYE GSHNHPLPMS ATAMASTTSA AASMLQSYSS  360
TSQQGHTAMV PISASTNLQG LNFSTSTLSQ NSRLPQHFYF PNSSISTTNS HPTVTLDLTA  420
PSPSHFGRFP AAVFSSNPRY PSTCLNFSSS PSSSLDHNNH TLQLQAPWNN NHTAAGYLNY  480
GNRLMLTETI ASATKAITSN PKFQSALAAA LTSFVGTNNG GGATTGPNLQ PTFPTPSEPS  540
QPSYATSLSC WGGRDGEWMV SHAADWGRLI QEGQRRNSDD VVGFGFTLSE PHELSEAGHV  600
AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	3e-71	WRKY family protein