PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1173820.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 333aa MW: 36992 Da PI: 4.7075 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 116 | 166 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g Pd.00g1173820.m01 116 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 166 59********.**********72....45*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MNPAVKYTQH RSHTKLVANS AAEFESVRPR VVRISVTDGD ATDSSSDDEP AESSFCGRRR 60 VKRFINEITI ESCSRETDAV WRSRTTRTGR KRASPKSGGP ASRRTLKAVA AAPAGKKFRG 120 VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDNA AIQLRGPDAL TNFAAPPAKS 180 LPDVKPVISS CYNSGDESHN NLCSPTSVLR CPSPSNEEAD SPSLKEEVPD IAEFRNVRDD 240 SCVSENFSEF SEYTSFESFI PDDIFDFQIP DFLEETSLRE VGILKEDFGD LGNFGDILVD 300 SVRDFEFGSS AWCVDDHFQD IGDLFSSDPL VAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 5e-45 | ERF family protein |