PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1169720.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 421aa MW: 47136.3 Da PI: 5.6535

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1169720.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.6e-05	302	344	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r RR ri ++++ LrellP + + + ++ ++++Ik L Pd.00g1169720.m02 302 VTDRSRRMRIAERLDALRELLPIS-----TEGGQSFVVDDVIDHIKFL 344 5689******************87.....2223345555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLMYQRLMPD GKPFYLVLRV WDRGHVAHDP INHVVRRRTD GAVHQHNAGK TARITHRRHL 60 LFLSGETLTT SSPSSSASRS LACSCRIKAE GVLPLVHMEG QSSLTDPMQL VPLDSCGDAA 120 IDVSQATGDD PSQQVSMAAE GTAYQTDDLF SPWWTEKPKP SLNSLSCVEF LAESSTFLPK 180 DHCEDILESI PLSVSGIDDV GGVSEFQRDV LYSSLGNACG SKLTDFSMDM DDWKQVRCLR 240 PVNDELVNAQ HQLHAKYHTS RTDDLYGDKK DSVSQVDPRA RSALPDFHSQ PHLHISTQRA 300 AVTDRSRRMR IAERLDALRE LLPISTEGGQ SFVVDDVIDH IKFLQLQIKD LCRSRLGGET 360 ITEPIIFREG YGHYFCHQNM LNEPLEEMMG KLLETNPMAA SQLLENKDLL LLPMDYSEPL 420 V

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLMYQRLMPD GKPFYLVLRV WDRGHVAHDP INHVVRRRTD GAVHQHNAGK TARITHRRHL  60
LFLSGETLTT SSPSSSASRS LACSCRIKAE GVLPLVHMEG QSSLTDPMQL VPLDSCGDAA  120
IDVSQATGDD PSQQVSMAAE GTAYQTDDLF SPWWTEKPKP SLNSLSCVEF LAESSTFLPK  180
DHCEDILESI PLSVSGIDDV GGVSEFQRDV LYSSLGNACG SKLTDFSMDM DDWKQVRCLR  240
PVNDELVNAQ HQLHAKYHTS RTDDLYGDKK DSVSQVDPRA RSALPDFHSQ PHLHISTQRA  300
AVTDRSRRMR IAERLDALRE LLPISTEGGQ SFVVDDVIDH IKFLQLQIKD LCRSRLGGET  360
ITEPIIFREG YGHYFCHQNM LNEPLEEMMG KLLETNPMAA SQLLENKDLL LLPMDYSEPL  420
V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	5e-17	bHLH family protein