PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1169720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 420aa MW: 47008.2 Da PI: 5.6535

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1169720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.6e-05	301	343	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r RR ri ++++ LrellP + + + ++ ++++Ik L Pd.00g1169720.m01 301 VTDRSRRMRIAERLDALRELLPIS-----TEGGQSFVVDDVIDHIKFL 343 5689******************87.....2223345555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MLMYQRLMPD GKPFYLVLRV WDRGHVAHDP INHVVRRRTD GAVHQHNAGK TARITHRRHL 60 LFLSGETLTT SSPSSSASRS LACSCRIKAE GVLPLVHMEG QSSLTDPMQL VPLDSCGDAA 120 IDVSQATGDD PSQQVSMAAE GTAYQTDDLF SPWWTEKPKP SLNSLSCVEF LAESSTFLPK 180 DHCEDILESI PLSVSGIDDV GGVSEFQRDV LYSSLGNACG SKLTDFSMDM DDWKVRCLRP 240 VNDELVNAQH QLHAKYHTSR TDDLYGDKKD SVSQVDPRAR SALPDFHSQP HLHISTQRAA 300 VTDRSRRMRI AERLDALREL LPISTEGGQS FVVDDVIDHI KFLQLQIKDL CRSRLGGETI 360 TEPIIFREGY GHYFCHQNML NEPLEEMMGK LLETNPMAAS QLLENKDLLL LPMDYSEPLV

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MLMYQRLMPD GKPFYLVLRV WDRGHVAHDP INHVVRRRTD GAVHQHNAGK TARITHRRHL  60
LFLSGETLTT SSPSSSASRS LACSCRIKAE GVLPLVHMEG QSSLTDPMQL VPLDSCGDAA  120
IDVSQATGDD PSQQVSMAAE GTAYQTDDLF SPWWTEKPKP SLNSLSCVEF LAESSTFLPK  180
DHCEDILESI PLSVSGIDDV GGVSEFQRDV LYSSLGNACG SKLTDFSMDM DDWKVRCLRP  240
VNDELVNAQH QLHAKYHTSR TDDLYGDKKD SVSQVDPRAR SALPDFHSQP HLHISTQRAA  300
VTDRSRRMRI AERLDALREL LPISTEGGQS FVVDDVIDHI KFLQLQIKDL CRSRLGGETI  360
TEPIIFREGY GHYFCHQNML NEPLEEMMGK LLETNPMAAS QLLENKDLLL LPMDYSEPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30980.1	5e-17	bHLH family protein