PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1169560.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 638aa MW: 71557.8 Da PI: 4.9464 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.5 | 1.4e-14 | 445 | 492 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Pd.00g1169560.m01 445 ANHVMAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 492 5899***********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence |
MAAPPSSSRL RSMLQASVQS VQWTYSLFWQ IYGYYNGAIK TRKTVQPMEV SAEEASLQRS 60 QQLRELYDSL SAGETNQPPA RRPCASLSPE DLTESEWFYL MCVSFSFPPG VGLPGKAYAR 120 RQHSARIQTV VCIPLLDGVV ELGTTERVPE DNAMVQHVKT FFVDHNHPPP PKPALSEHST 180 SNPATSSDHP HFHSPHLPAM CTDPPLDAAQ EDEEEDEEEE DQEEDEEAES DSEAETGRNG 240 QPVPPGPNPP AVSAPAAEPS ELMQLEMSED IRLGSPDDAS NNLDSDFHLL AVSQSRVNPA 300 DQQRQADSYR AESTRRWPSV QEPLSSGLQP PPQGPLALEE LTHDDTHYSE TVSTILQRQA 360 IRWTDSSSTD HVACSTQSAF IKWTTRVENH MLVPIEGTSQ WLLKYILFSV PFLHTKYRDE 420 NSPKSHEGDA STRLRKGTPQ DELSANHVMA ERRRREKLNE RFIILRSLVP FVTKMDKASI 480 LGDTIEYVKQ LRKKIQDLEA RNVQMEDDQR SRSSGEIHRS NSMKELQSGL TVVERTRVGP 540 PGSDKRKLRI VEGSGEVSII ESDGLLELQC PYREGLLLDI MQTLRELRIE TTVVQSSLNN 600 GFFVAELRAK VKENVNGKKI SITEVKRVIN QIIPQSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 451 | 456 | ERRRRE |
2 | 452 | 457 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 8e-72 | bHLH family protein |