PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1168920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 388aa    MW: 42306 Da    PI: 6.2372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1168920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.5e-15160209355
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Pd.00g1168920.m01 160 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 209
                        9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MIELPCHKRN LPTISDQNRE EEEKSSNLEK SSSSSVAAIA SSVPTSFFHS PPHFNYGIYY  60
GVEGDTSAGL YSPLSMMPLK SDGSLCIMEA LNRSQQPQGI VTTTTTSTPK LEDFFGGATM  120
GTHYENNDRE AMALSLDSIQ EYVAHLRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA  180
GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDITR YDVDRIMASN TLLAGELAKR  240
NKETAPVNEA VTNQNHVAQT SNGEAIVSLK NINEGEDWKM ALYQSSQQLD QKQPSTEPHN  300
AIQAEAEDSG KMGAAHVSNA SSLVTSLSSS REGSPDKSCL PSFFGMPPAA SKFFTSSSDT  360
VSSWIPTVQS RPGLTMPHMP IFAAWTDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-58AP2 family protein