PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1167460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 352aa    MW: 39239.1 Da    PI: 5.8542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1167460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20199249255
                AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ kl+g
  Pd.00g1167460.m01 199 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 249
                        8********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MALSSDMAGL DQVSALELIK KHLLGEFSPA AKSSVTELSD SASSFPQNQW SPEANSDLSR  60
SQSDSLCSKS SSTFDSSIEI SDYLNSNEIF EFEFNSTDFL DFEAKPQVID LTTPKSANLR  120
SQNSFEFESK PQISDDFFEF EQKPQILNRT APKPANPTRK PALTVSLPNK TEWIHFASSD  180
PAVKAPVQKS SSNEEKKKHY RGVRQRPWGK YAAEIRDPNR RGSRVWLGTF DTAIEAAKAY  240
DRAAFKLRGS KAILNFPLEA GKAEPVVAVE RKRRREEDRE EVKAVAVAVK KERLTEAPEA  300
VGCIKDMPLT PSSWMAFWDS ESLEDVKGIF SVPPLSPLSP HPTMGYPQLM VV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271275RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-60ERF family protein