PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1167110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 18005 Da PI: 5.2466 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.6 | 8.7e-15 | 3 | 44 | 11 | 55 |
AP2 11 krgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g Pd.00g1167110.m01 3 QWGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 44 6**********843...6**********************99887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence |
MRQWGKWVSE IREPRKKSRI WLGTFPTPEM AARAHDVAAL TIKGRSAVLN FPELAQELPR 60 PASASAKDIQ AAATKAAALN YPISCSSSGR EADAETEAEP SQHRQAVHET QDSSTSPSTN 120 NDDTFFDLPD LLLDFGHHRD HGFCFSVPWL EEPNNFLWME N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-34 | ERF family protein |