PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1164500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 86aa MW: 9564.79 Da PI: 4.1946 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 23.8 | 1.1e-07 | 33 | 81 | 1 | 60 |
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 +Fl+k+y+i +d++++ ++s s+ +nsfvvld+++fa + F RQLn+Y Pd.00g1164500.m01 33 SFLTKTYDIADDPATNLIVSCSRYNNSFVVLDPQNFAI-----------VMCFFRQLNTY 81 59**********************************98...........45566666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence |
MNPDQDPVSL SSSGAAPAHP PPMERLYDQG PPSFLTKTYD IADDPATNLI VSCSRYNNSF 60 VVLDPQNFAI VMCFFRQLNT YVSMTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 3e-17 | HSF family protein |