PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1164280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 355aa MW: 41024.8 Da PI: 4.7818

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1164280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.6	1.5e-36	34	126	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y+i++d+++++++sws+++nsfvvld+++f+ ++Lp+yFkh+nf+SFvRQLn+YgF+kv++++ weF++k F +g+k+l Pd.00g1164280.m01 34 FLTKTYDIVDDPTTNDIVSWSRDNNSFVVLDPQKFSISLLPRYFKHNNFSSFVRQLNTYGFRKVDTDR---------WEFANKGFLRGQKHL 116 9***************************************************************99.........*********** PP XXXXXXXXXX CS HSF_DNA-bind 94 lekikrkkse 103 l++i+r+k++ Pd.00g1164280.m01 117 LKNIRRRKTS 126 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MNSDQDPVSL SSSGAVPDHP LPMDKLYDQG PPPFLTKTYD IVDDPTTNDI VSWSRDNNSF 60 VVLDPQKFSI SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANKGFL RGQKHLLKNI 120 RRRKTSYHPQ ASQKALDSCV EVGKFGLDGE IDQLRRDKQV LMGELVKLRQ QQQTTRVYLH 180 GMENRLKRTE MKQQHLKNFL ARAMQNPNFV QQLAQQKDKR NELEEAITKK RRRPIEQGPS 240 TFEVDELGQV GAETFVKVEP QEYDDMCDHF ENPELDTFAI DMQGITGSQN VHDEEECIEK 300 EEGNESGSKD PGKSFWHELL NESFDEEIGM LGVQEDDEDV DVFVEELVYL ASSPK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MNSDQDPVSL SSSGAVPDHP LPMDKLYDQG PPPFLTKTYD IVDDPTTNDI VSWSRDNNSF  60
VVLDPQKFSI SLLPRYFKHN NFSSFVRQLN TYGFRKVDTD RWEFANKGFL RGQKHLLKNI  120
RRRKTSYHPQ ASQKALDSCV EVGKFGLDGE IDQLRRDKQV LMGELVKLRQ QQQTTRVYLH  180
GMENRLKRTE MKQQHLKNFL ARAMQNPNFV QQLAQQKDKR NELEEAITKK RRRPIEQGPS  240
TFEVDELGQV GAETFVKVEP QEYDDMCDHF ENPELDTFAI DMQGITGSQN VHDEEECIEK  300
EEGNESGSKD PGKSFWHELL NESFDEEIGM LGVQEDDEDV DVFVEELVYL ASSPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-116	HSF family protein