PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1163300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 734aa MW: 80254.4 Da PI: 6.1351

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1163300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.6e-15	467	503	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCk+skClk+YC+Cfaag +C e C+C++C+Nk Pd.00g1163300.m01 467 CKRCNCKRSKCLKLYCDCFAAGLYCIEPCSCQECFNK 503 79**********************************8 PP
2	TCR	51.7	1.8e-16	551	590	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnC+ks ClkkYCeCf+ g+ Cs C+C +CkN+ Pd.00g1163300.m01 551 RHKRGCNCRKSGCLKKYCECFQGGAGCSILCRCIGCKNTF 590 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MQDSPVFNYI SSLSPIEPVK SRGNDHTFNS LTFASLPSIF TSPQNVSLGE TRFSLKRHHS 60 SEASNPESFQ TPNPSDKLES VPVAVEQSYF GTKQSECFTP GSSGTEVTNA IPTENLELAI 120 ELSNTLKYSS GSPDRNVPCD ATGTVLETAA TPASLVQSVV HHSEERHSSF ERETHLRRIF 180 GMEREKEAAG VDWTRLISDA SDLLNFDSTT IEESSDGEDP KTVDPGAICF ISNILQDNHD 240 DMEVMESGPI DSSEQYESGK FSNQSEGIGD LKETDEAPAV LSRNLMDKLN VDDKCPNCIH 300 SSCKHSSQSY AISRRCLDFD RAETHKRKSI CDTSGSYSVP LQSNCEVTLV EKKLIRTTAG 360 CDYSSSRLPG IGLHLNALAT TSESNLSKVV NHETQASESQ VTETPNSKIS STCFTPSEVS 420 RDESCRSEVH IAETPPEACA PVGVESDHSS PENKRLKSQH VGESLACKRC NCKRSKCLKL 480 YCDCFAAGLY CIEPCSCQEC FNKPIYENIV VETRRLIESR NPLAFAPKVI GSINATPQFG 540 EETNSTPTSA RHKRGCNCRK SGCLKKYCEC FQGGAGCSIL CRCIGCKNTF GRKDEAEESE 600 IEEHKSRVRK KDATDVSLGR VKDQDLPMTL PGICRPSGQL TASFSGKKIF SLHSVLSSPQ 660 PERHLQVIPE EETLEALDNS CSQPSGVKST SPNSKRVSPP HSGSEFGSAA WRGGRKLVLR 720 SIPSFPTLAS PRKH

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MQDSPVFNYI SSLSPIEPVK SRGNDHTFNS LTFASLPSIF TSPQNVSLGE TRFSLKRHHS  60
SEASNPESFQ TPNPSDKLES VPVAVEQSYF GTKQSECFTP GSSGTEVTNA IPTENLELAI  120
ELSNTLKYSS GSPDRNVPCD ATGTVLETAA TPASLVQSVV HHSEERHSSF ERETHLRRIF  180
GMEREKEAAG VDWTRLISDA SDLLNFDSTT IEESSDGEDP KTVDPGAICF ISNILQDNHD  240
DMEVMESGPI DSSEQYESGK FSNQSEGIGD LKETDEAPAV LSRNLMDKLN VDDKCPNCIH  300
SSCKHSSQSY AISRRCLDFD RAETHKRKSI CDTSGSYSVP LQSNCEVTLV EKKLIRTTAG  360
CDYSSSRLPG IGLHLNALAT TSESNLSKVV NHETQASESQ VTETPNSKIS STCFTPSEVS  420
RDESCRSEVH IAETPPEACA PVGVESDHSS PENKRLKSQH VGESLACKRC NCKRSKCLKL  480
YCDCFAAGLY CIEPCSCQEC FNKPIYENIV VETRRLIESR NPLAFAPKVI GSINATPQFG  540
EETNSTPTSA RHKRGCNCRK SGCLKKYCEC FQGGAGCSIL CRCIGCKNTF GRKDEAEESE  600
IEEHKSRVRK KDATDVSLGR VKDQDLPMTL PGICRPSGQL TASFSGKKIF SLHSVLSSPQ  660
PERHLQVIPE EETLEALDNS CSQPSGVKST SPNSKRVSPP HSGSEFGSAA WRGGRKLVLR  720
SIPSFPTLAS PRKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-86	CPP family protein