PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1160850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 333aa MW: 37643.2 Da PI: 4.9077

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1160850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.4e-09	264	296	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ Pd.00g1160850.m01 264 PYPTEEEKLHLSEVTGLDQKQINNWFINQRKRH 296 8*****************************885 PP
2	ELK	36.2	1.3e-12	216	237	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL +L++EF+ Pd.00g1160850.m01 216 ELKDMLLHKYSGYLTNLRKEFL 237 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MNMEDFYRLN PGVISGSEID VNVVHQVENM ATSTSNTSCG FHGHPHPQGH VVDDNMLLFQ 60 TEGMESDHHM SDLIKTQIAN HPRFPDLVDA YLECQKVGAP PEMKSLLEEI GRVSHPMSTC 120 SEIGADPELD KFMESYCEVL RGYKEELSKP FDEATNFLTN IQSQLRNLCK GTFPKTSWDC 180 NSDEGVGSSE EEFSCGEVEA AESQETAAAR SGGDRELKDM LLHKYSGYLT NLRKEFLKKR 240 KKGKLPKDAR TALLDWWTTH YRWPYPTEEE KLHLSEVTGL DQKQINNWFI NQRKRHWKPS 300 EDMRFALMEG VGGSIGAPML FDAGVGTGNI DDM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	241	LRKEFLKKRK
2	238	242	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	7e-81	TALE family protein