PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1160610.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 205aa    MW: 22931.4 Da    PI: 8.647
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1160610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-11249454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  Pd.00g1160610.m01  2 SHIAVERNRRKQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                       89************************9...9******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSHIAVERNR RKQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESNK  60
RRKSLSPSPN PSPKPVVLPQ QYPSTPQLDQ NPNFNFNLGV DNHHHVINKE LAIGACCNSP  120
VADVEAKISG SNVVLKIISR RTSGQIAKII GVLERLSFEV LHLNISSMED TVLYSFVIKI  180
GLECQLSVEE LVLEVQQSLR SESTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.19e-80bHLH family protein