PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1159640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 444aa    MW: 49923.9 Da    PI: 7.5703
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1159640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18255304356
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        ++GVr+++ +g+Wv eIr  ++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g1159640.m01 255 FRGVRQRH-WGKWVTEIRLSRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 304
                        8******9.**********432...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MHTESMPDRK AAEHWIYKRE GFRKVDFPTH CSYGPVNEDE PFKWEGVIMG PSYSPYEGGV  60
FFLSIDLPQD YPTKPPTIKF LTKVYHPNIA IWCGSGSKSS LSPESSSSST EEFSSSGSNL  120
IDNMPELTKS PFVPVNFLET FPQLSRVQVS DQPPTSPPSL SSNSMFPYLS IPSFPTPQVI  180
DQIQRQPGMI EWLKLNQNLA SHSSKGFNDY WLSATKTQPM KRTGRSSKLQ QQINQHHKQP  240
HNNLSSASSS PGNLFRGVRQ RHWGKWVTEI RLSRNRTRVW LGTFDTAEEA AIAYDTAAYM  300
LRGEHAHLNF PDLKHQLKAN ALKGNTAALL ESKLQAISSS QAHQKAIMES KSSQLASPNK  360
HSADDHDDHK YSNLMINSNF SQNPTRKEWQ FGLESKVGSD HQVVIESKKS QQDLVSADVD  420
AVQLSRMPSL DMDMIWDALL VSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-52ERF family protein