PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1155780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 538aa MW: 61076.2 Da PI: 8.042

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1155780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.7	1.1e-40	53	130	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C adls+ak+yhrrhkvC+ hska+vvlvsgl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ Pd.00g1155780.m01 53 CCQADRCPADLSDAKQYHRRHKVCDLHSKAQVVLVSGLRQRFCQQCSRFHELPEFDDTKRSCRRRLAGHNERRRKNSV 130 6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEKPHVVVKE EEEEDEEFDH HQQLEDHDKK KKGIVGGSGS VKRSGTSGGG TRCCQADRCP 60 ADLSDAKQYH RRHKVCDLHS KAQVVLVSGL RQRFCQQCSR FHELPEFDDT KRSCRRRLAG 120 HNERRRKNSV ESNAEGPSRN GAGTQLKDVC GQDSEGSPSS TSEEKPEFLF VQLPEIRKDV 180 HCPICLGIIK KTRTVMECLH RFCRECIDKS MRMGNNECPA CRTHCASRRS LRDDPNYDAL 240 IAALYPDIEK YEEEELAFHE EERTRNEQIQ ASIAQIFQRQ SEALIRRRSF GKDTPDAFIT 300 RSQRNNRSSF LRRRSSRATE IQGSVDNEDE NDNNNMGKNS SSTDERRTEV TPRRLRRRAG 360 SRCSQPSSSL ANSSGGCTEN DLEVNRENRG ISPGIVWSSE MLAWGRGGAR SHTRHGISSG 420 CSNKNSRSTR LSKLVDYLRS IEENNDELDV HLMLISLDKR CTPSLQQPHL CCRPSLSVKH 480 LCDYVSRQTP LLAEEVEFLA VKGYDLQILQ AEETLGGVKA ICTSSRDHLI LAYRRKEI

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEKPHVVVKE EEEEDEEFDH HQQLEDHDKK KKGIVGGSGS VKRSGTSGGG TRCCQADRCP  60
ADLSDAKQYH RRHKVCDLHS KAQVVLVSGL RQRFCQQCSR FHELPEFDDT KRSCRRRLAG  120
HNERRRKNSV ESNAEGPSRN GAGTQLKDVC GQDSEGSPSS TSEEKPEFLF VQLPEIRKDV  180
HCPICLGIIK KTRTVMECLH RFCRECIDKS MRMGNNECPA CRTHCASRRS LRDDPNYDAL  240
IAALYPDIEK YEEEELAFHE EERTRNEQIQ ASIAQIFQRQ SEALIRRRSF GKDTPDAFIT  300
RSQRNNRSSF LRRRSSRATE IQGSVDNEDE NDNNNMGKNS SSTDERRTEV TPRRLRRRAG  360
SRCSQPSSSL ANSSGGCTEN DLEVNRENRG ISPGIVWSSE MLAWGRGGAR SHTRHGISSG  420
CSNKNSRSTR LSKLVDYLRS IEENNDELDV HLMLISLDKR CTPSLQQPHL CCRPSLSVKH  480
LCDYVSRQTP LLAEEVEFLA VKGYDLQILQ AEETLGGVKA ICTSSRDHLI LAYRRKEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	1e-39	SBP family protein