PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1154700.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1189aa MW: 132998 Da PI: 5.4706

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1154700.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.4	1.8e-55	41	157	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 l+ k+rwl++ ei++iL n++k+++++e+++ p+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++ Pd.00g1154700.m02 41 LEAKHRWLRPAEICEILRNYKKFHISSEPASMPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENEN 132 6679************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee+l++ivlvhy+evk Pd.00g1154700.m02 133 FQRRSYWMLEEDLQHIVLVHYREVK 157 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1189 aa Download sequence
MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY 60 KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL 120 HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE 180 EIALNSEMEN SVSSSFDPNT FQMRSQATDT XXXXEVKGNR TNFNHTKGTE EAVPYSHETE 240 EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAHQA SSQLQPFLEL 300 LQPKAEKINA GFSDAFYPMS FSNNYQEKLS AIPGVNFGSL TQAYKREDGN VAGVSYEPTK 360 NLNSSLWEAA LENSATGFQS LSFQPSFSAT HSDTMGIISK QENGMLGDLF TDSFEKKQMC 420 ESKPRVQQGW QTSKENSSCS SSWLMDRNLH SNTVDDVSSF HEGLNAANLL NSLAPCHMNS 480 DKTNDYSIPN DLQIQPSTTE QEYYLKSISK RNETIEGKAN HASAIKPLLD GPFTEGLKKL 540 DSFNRWMSRE LGDVDDTQTQ SNSETYWDTV ESENGVDESS VPLQVRLDSY MLGPSLSQDQ 600 LFSIIDFSPN WAYENSEIKV LITGRFLKSQ QAETCKWSCM FGEVEVRAEV IADGVLRCYT 660 PVHKAGRVPF YVTCSNRLAC SEVREFEYRV GQIPDYDAKD DDSGCTNDIL SMRFGKLLSL 720 SSTSPTFDPN SLVENSVLNN KIDSLLKNDN GEWDRMLQLT SDEDFSVERV EEQLLHQLLK 780 EKLHVWLLQK LADGGKGPSV LDEDGQGVLH FGAALGYDWV LLPTITAGVS VNFRDVNGWT 840 ALHWAAFCGR ERTVASLISL GAAPGALTDP STKYPTGRTP ADLASAQGHK GIAGYLAESA 900 LSAHLSSLNL DIKEGNNAGI SGANAVQTVS ERTATPIGNG DLTDGLSLRD SLTAVCNAAQ 960 AAARIHQVFR VQSFQRKQLK EYGGNEFGIS DEHALSLIAV KSHKPGKCDE HVDAAAIRIQ 1020 NKFRSWKGRK DYLIIRQRIV KIQAHVRGHQ VRKNYRKIVW SVGIVEKIIL RWRRKGSGLR 1080 GFKSEPLIEG PSVQVSSSKD DDYDLLKEGR KQNEERLQKA LARVKSMVQY PEARDQYRRL 1140 LNVVTEIKET KVVCDSAVNS SEGRADMDDD LIDFAELLDE DIFMPTAGP

Sequence ? help Back to Top

Protein Sequence Length: 1189 aa Download sequence

MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY  60
KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL  120
HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE  180
EIALNSEMEN SVSSSFDPNT FQMRSQATDT XXXXEVKGNR TNFNHTKGTE EAVPYSHETE  240
EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAHQA SSQLQPFLEL  300
LQPKAEKINA GFSDAFYPMS FSNNYQEKLS AIPGVNFGSL TQAYKREDGN VAGVSYEPTK  360
NLNSSLWEAA LENSATGFQS LSFQPSFSAT HSDTMGIISK QENGMLGDLF TDSFEKKQMC  420
ESKPRVQQGW QTSKENSSCS SSWLMDRNLH SNTVDDVSSF HEGLNAANLL NSLAPCHMNS  480
DKTNDYSIPN DLQIQPSTTE QEYYLKSISK RNETIEGKAN HASAIKPLLD GPFTEGLKKL  540
DSFNRWMSRE LGDVDDTQTQ SNSETYWDTV ESENGVDESS VPLQVRLDSY MLGPSLSQDQ  600
LFSIIDFSPN WAYENSEIKV LITGRFLKSQ QAETCKWSCM FGEVEVRAEV IADGVLRCYT  660
PVHKAGRVPF YVTCSNRLAC SEVREFEYRV GQIPDYDAKD DDSGCTNDIL SMRFGKLLSL  720
SSTSPTFDPN SLVENSVLNN KIDSLLKNDN GEWDRMLQLT SDEDFSVERV EEQLLHQLLK  780
EKLHVWLLQK LADGGKGPSV LDEDGQGVLH FGAALGYDWV LLPTITAGVS VNFRDVNGWT  840
ALHWAAFCGR ERTVASLISL GAAPGALTDP STKYPTGRTP ADLASAQGHK GIAGYLAESA  900
LSAHLSSLNL DIKEGNNAGI SGANAVQTVS ERTATPIGNG DLTDGLSLRD SLTAVCNAAQ  960
AAARIHQVFR VQSFQRKQLK EYGGNEFGIS DEHALSLIAV KSHKPGKCDE HVDAAAIRIQ  1020
NKFRSWKGRK DYLIIRQRIV KIQAHVRGHQ VRKNYRKIVW SVGIVEKIIL RWRRKGSGLR  1080
GFKSEPLIEG PSVQVSSSKD DDYDLLKEGR KQNEERLQKA LARVKSMVQY PEARDQYRRL  1140
LNVVTEIKET KVVCDSAVNS SEGRADMDDD LIDFAELLDE DIFMPTAGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein