PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1154700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1129aa MW: 126246 Da PI: 5.7112

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1154700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177.5	1.7e-55	41	157	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 l+ k+rwl++ ei++iL n++k+++++e+++ p+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een++ Pd.00g1154700.m01 41 LEAKHRWLRPAEICEILRNYKKFHISSEPASMPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENEN 132 6679************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee+l++ivlvhy+evk Pd.00g1154700.m01 133 FQRRSYWMLEEDLQHIVLVHYREVK 157 ********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1129 aa Download sequence
MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY 60 KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL 120 HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE 180 EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAHQA SSQLQPFLEL 240 LQPKAEKINA GFSDAFYPMS FSNNYQEKLS AIPGVNFGSL TQAYKREDGN VAGVSYEPTK 300 NLNSSLWEAA LENSATGFQS LSFQPSFSAT HSDTMGIISK QENGMLGDLF TDSFEKKQMC 360 ESKPRVQQGW QTSKENSSCS SSWLMDRNLH SNTVDDVSSF HEGLNAANLL NSLAPCHMNS 420 DKTNDYSIPN DLQIQPSTTE QEYYLKSISK RNETIEGKAN HASAIKPLLD GPFTEGLKKL 480 DSFNRWMSRE LGDVDDTQTQ SNSETYWDTV ESENGVDESS VPLQVRLDSY MLGPSLSQDQ 540 LFSIIDFSPN WAYENSEIKV LITGRFLKSQ QAETCKWSCM FGEVEVRAEV IADGVLRCYT 600 PVHKAGRVPF YVTCSNRLAC SEVREFEYRV GQIPDYDAKD DDSGCTNDIL SMRFGKLLSL 660 SSTSPTFDPN SLVENSVLNN KIDSLLKNDN GEWDRMLQLT SDEDFSVERV EEQLLHQLLK 720 EKLHVWLLQK LADGGKGPSV LDEDGQGVLH FGAALGYDWV LLPTITAGVS VNFRDVNGWT 780 ALHWAAFCGR ERTVASLISL GAAPGALTDP STKYPTGRTP ADLASAQGHK GIAGYLAESA 840 LSAHLSSLNL DIKEGNNAGI SGANAVQTVS ERTATPIGNG DLTDGLSLRD SLTAVCNAAQ 900 AAARIHQVFR VQSFQRKQLK EYGGNEFGIS DEHALSLIAV KSHKPGKCDE HVDAAAIRIQ 960 NKFRSWKGRK DYLIIRQRIV KIQAHVRGHQ VRKNYRKIVW SVGIVEKIIL RWRRKGSGLR 1020 GFKSEPLIEG PSVQVSSSKD DDYDLLKEGR KQNEERLQKA LARVKSMVQY PEARDQYRRL 1080 LNVVTEIKET KVVCDSAVNS SEGRADMDDD LIDFAELLDE DIFMPTAGP

Sequence ? help Back to Top

Protein Sequence Length: 1129 aa Download sequence

MYEIQVGSGC GISVTTTRIE FMADTKRYGL GNQLDIAQIL LEAKHRWLRP AEICEILRNY  60
KKFHISSEPA SMPPGGSLFL FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE RLKAGSVDVL  120
HCYYAHGEEN ENFQRRSYWM LEEDLQHIVL VHYREVKGNR TNFNHTKGTE EAVPYSHETE  180
EIALNSEMEN SVSSSFDPNT FQMRSQATDT TSLSSAQASE FEDAESAHQA SSQLQPFLEL  240
LQPKAEKINA GFSDAFYPMS FSNNYQEKLS AIPGVNFGSL TQAYKREDGN VAGVSYEPTK  300
NLNSSLWEAA LENSATGFQS LSFQPSFSAT HSDTMGIISK QENGMLGDLF TDSFEKKQMC  360
ESKPRVQQGW QTSKENSSCS SSWLMDRNLH SNTVDDVSSF HEGLNAANLL NSLAPCHMNS  420
DKTNDYSIPN DLQIQPSTTE QEYYLKSISK RNETIEGKAN HASAIKPLLD GPFTEGLKKL  480
DSFNRWMSRE LGDVDDTQTQ SNSETYWDTV ESENGVDESS VPLQVRLDSY MLGPSLSQDQ  540
LFSIIDFSPN WAYENSEIKV LITGRFLKSQ QAETCKWSCM FGEVEVRAEV IADGVLRCYT  600
PVHKAGRVPF YVTCSNRLAC SEVREFEYRV GQIPDYDAKD DDSGCTNDIL SMRFGKLLSL  660
SSTSPTFDPN SLVENSVLNN KIDSLLKNDN GEWDRMLQLT SDEDFSVERV EEQLLHQLLK  720
EKLHVWLLQK LADGGKGPSV LDEDGQGVLH FGAALGYDWV LLPTITAGVS VNFRDVNGWT  780
ALHWAAFCGR ERTVASLISL GAAPGALTDP STKYPTGRTP ADLASAQGHK GIAGYLAESA  840
LSAHLSSLNL DIKEGNNAGI SGANAVQTVS ERTATPIGNG DLTDGLSLRD SLTAVCNAAQ  900
AAARIHQVFR VQSFQRKQLK EYGGNEFGIS DEHALSLIAV KSHKPGKCDE HVDAAAIRIQ  960
NKFRSWKGRK DYLIIRQRIV KIQAHVRGHQ VRKNYRKIVW SVGIVEKIIL RWRRKGSGLR  1020
GFKSEPLIEG PSVQVSSSKD DDYDLLKEGR KQNEERLQKA LARVKSMVQY PEARDQYRRL  1080
LNVVTEIKET KVVCDSAVNS SEGRADMDDD LIDFAELLDE DIFMPTAGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein