PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1154210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 324aa MW: 36439.1 Da PI: 6.6807

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1154210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.6	5.5e-14	119	170	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr ++P + ++++ + a+i A++++k+L+ Pd.00g1154210.m01 119 QRMTHIAVERNRRKQMNDYLAALRAMMPAC---YAQRGDQASIIGGAINFVKELE 170 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MTLEAVVLQA DRYNYGFKDF HAIGGGGGSW SHGFGFGEDH QEEKVYTDHH MLNNDVGQQG 60 FNNLSLEASM LQSVNDFETN SGPAFNRVFS STEAPAASTG RRKRRRIQNI KNKEDMETQR 120 MTHIAVERNR RKQMNDYLAA LRAMMPACYA QRGDQASIIG GAINFVKELE QLLQSLEGHR 180 RIEQQSDHLN LASIFSSFFT FPQYSTCLNS HGHGVYNSSV HPNELMAEKR SAIADVEVTM 240 VESHANVKVL MKKHPRQLLK MVLGLHSLGL MILHVNVTTA DNMILYTFSV KVEDNSQLTS 300 MNEIAADVYE MVGRIQEEAQ LLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	108	GRRKRRRIQ
2	102	106	RKRRR
3	103	107	KRRRI
4	120	131	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	7e-68	bHLH family protein