PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152940.m03
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 335aa    MW: 36675.1 Da    PI: 10.5212
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152940.m03genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-2097147256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  Pd.00g1152940.m03  97 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 147
                        69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSDKNDTAVR NHTHVFHQNR WARWLEDPPL SLKMRKKPTL VGVPLGERGE QLLVQERERF  60
KGRIKAKGGQ APCNMAPREK TATAVRANGN GNVKEVHFRG VRKRPWGRYA AEIRDPGKKS  120
RVWLGTFDTA EEAARAYDAA AREFRGAKAK TNFPLPSENI SLNMTKNNNI NINKNSSGSN  180
NQSPSQSSTV ESSSREPPAL MVDSSPLDLN LAQGVSSGGF GSGPIRFPFQ HHQVPSVGAV  240
IGVPASAAAA ANHVLYFDSV FRAGMVKSHQ FHQRLRFDHH NLQQHDFHAY GGGGVFACGA  300
QSDSSDSSSV VDLNNHDLPR RGLLDLNLPP PPELA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-26ERF family protein