PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1152850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 1764aa MW: 197917 Da PI: 5.0654

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1152850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	33	88	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps++ r+eL++klgLt+rq ++WF+ rR k+kk Pd.00g1152850.m01 33 PKRQMKTPFQLETLEKAYALETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKK 88 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1764 aa Download sequence
MEGASEGENP TKNQENNNSN GKFNNSSEGQ SKPKRQMKTP FQLETLEKAY ALETYPSEAI 60 RAELSEKLGL TDRQLQMWFC HRRLKDKKEG GPAKKQRKSV PTLPEPPIDD LAHGSEPGSD 120 YGSGSGSGSS PFGHAELRNV VSRSGADDVT MRRRYYESPQ SILELRAIAC VEAQLGEPLR 180 EDGPVLGVEF DRLPPDAFGA PIVAEQQKRA AHALEGKYER HDAKPNKATP RALHEYPFLQ 240 DHSSIRSDAY GQAAQSHFQD SPIDGPSARA SSFAVGNEPL SRVHGVHGHG HVSRVRLLSQ 300 QERQAVAFPS PSDDGCVPQR DSFTNVRVNT QFSDPPTVAL ENSNVLSDGQ INDSMLRMER 360 KRKSEEARIA KEVEAHEIRI RKELEKQDIL RRKNEERMRK EMERHDRERR KEEERLMRER 420 QREEERSKRE QKREIERREK FLQKEYIRAE KRRQKEELRK EREAVRRKAA LEKATARRLA 480 KESMELIEDE QLELMELAAA SKGLSSIICI DLDTLQNLDA FRDSLAAFPP KSVQLKRPFA 540 VQPWINSEEN IGNFLMVWRF LITFADVLEL WPFTLDEFVQ AFHDYDSRLL GEIHVALLRL 600 IIKDIEDVAR TPSTGLGVNQ NGAANPGGGH PQIVEGAYAW GFDIRNWQQH LNLLTWPEIF 660 RQLALSAGFG PQLKKRSTAW SYSPDNDEGK GCQDAISNLR NGSAAENAFA IMQEKGLLAP 720 RKSRHRLTPG TVKFAAFHVL SLEGNKGLTV LELADKIQKS GLRDLTTSKT PEASISVALT 780 RDTKLFERIA PSTYRVRAAY RKDPADAEAI LSAARKKIQI FENGFLAAED ADDVERDDAD 840 EVENDEVERD EDFECDEVDD DPEVDDLATP SVAKKSPDDY NEVITFSENG KDLCNDVALN 900 VQNEFENDVS SSPVSGSKDA NCPSASSKQC VSGADISASN LDQENMEIDE SKSGESWVQG 960 LTEGEYSDLS VEERLNGLVT LIGVANEGNS IRVVLEDRLE AANALKKQMW AEAQLDKSRL 1020 KEENVGKLDF PSFVGGKSET QVIGVEDGQS PVRDVDNRNI EASPGTAENQ KSIHGSQGVQ 1080 NQLNGLPVER TLGAQDISMG PDNFLSQQLA YASKRSRSQL KSYIAHRAEE MYAYRSLPLG 1140 QDRRHNRYWQ FVASASSNDP GSGRIFIELN NGSWRLIDTE EAFDALLTSL DTRGIRESHL 1200 RLMLQKIEAS FKENVRKTAH CPNSAGPSKN RVKNEADMDS SPDCPSGFDS PGSTVCALNS 1260 DTAETSSSFR IELDRNEAEK RAALRRYQDF QKWMWKECFS SSTFCAMKYA KKRCRSLFDV 1320 CDFCLSCYYF EDSHCAFCHQ TFSAFYANFN FSEHVIQCKE KRKLEPWDSH IPCTSLPLAR 1380 RLLKALIAHV EVSIPPEALQ SFWTEDRRRT WGGKLNASSS TEELLQILTL LETAVKRDFL 1440 SSNFAATEEL LGTGKQSEAF VPDFLDSGSV PLLPWIPHTT AAVALRLHEM DSSITHIQLE 1500 KAEPNGDKEV KEYLKLPMRL APLKESEHTE VGHNEYIREE NNTHLKSARN SFRRGRGGRE 1560 QGRGKKWQRK VNNSKSGASR QKGSGNLSQG FRPVGKRTQG QGSARGRRTV RKRRTKDRAV 1620 EGTPLGRMTD VRSSPESGGE SPRNLGEEWD DEKIDMIQMK GDEQGEGYEQ AEALESEDDD 1680 QAVGYEQGNW ETGFDGTSSG WHEGLLEASD EDMDASEDDN NGIEEVRDED SEGDVDMSDA 1740 SDEIQNKITN DDGSDSAVSD DYSD

Sequence ? help Back to Top

Protein Sequence Length: 1764 aa Download sequence

MEGASEGENP TKNQENNNSN GKFNNSSEGQ SKPKRQMKTP FQLETLEKAY ALETYPSEAI  60
RAELSEKLGL TDRQLQMWFC HRRLKDKKEG GPAKKQRKSV PTLPEPPIDD LAHGSEPGSD  120
YGSGSGSGSS PFGHAELRNV VSRSGADDVT MRRRYYESPQ SILELRAIAC VEAQLGEPLR  180
EDGPVLGVEF DRLPPDAFGA PIVAEQQKRA AHALEGKYER HDAKPNKATP RALHEYPFLQ  240
DHSSIRSDAY GQAAQSHFQD SPIDGPSARA SSFAVGNEPL SRVHGVHGHG HVSRVRLLSQ  300
QERQAVAFPS PSDDGCVPQR DSFTNVRVNT QFSDPPTVAL ENSNVLSDGQ INDSMLRMER  360
KRKSEEARIA KEVEAHEIRI RKELEKQDIL RRKNEERMRK EMERHDRERR KEEERLMRER  420
QREEERSKRE QKREIERREK FLQKEYIRAE KRRQKEELRK EREAVRRKAA LEKATARRLA  480
KESMELIEDE QLELMELAAA SKGLSSIICI DLDTLQNLDA FRDSLAAFPP KSVQLKRPFA  540
VQPWINSEEN IGNFLMVWRF LITFADVLEL WPFTLDEFVQ AFHDYDSRLL GEIHVALLRL  600
IIKDIEDVAR TPSTGLGVNQ NGAANPGGGH PQIVEGAYAW GFDIRNWQQH LNLLTWPEIF  660
RQLALSAGFG PQLKKRSTAW SYSPDNDEGK GCQDAISNLR NGSAAENAFA IMQEKGLLAP  720
RKSRHRLTPG TVKFAAFHVL SLEGNKGLTV LELADKIQKS GLRDLTTSKT PEASISVALT  780
RDTKLFERIA PSTYRVRAAY RKDPADAEAI LSAARKKIQI FENGFLAAED ADDVERDDAD  840
EVENDEVERD EDFECDEVDD DPEVDDLATP SVAKKSPDDY NEVITFSENG KDLCNDVALN  900
VQNEFENDVS SSPVSGSKDA NCPSASSKQC VSGADISASN LDQENMEIDE SKSGESWVQG  960
LTEGEYSDLS VEERLNGLVT LIGVANEGNS IRVVLEDRLE AANALKKQMW AEAQLDKSRL  1020
KEENVGKLDF PSFVGGKSET QVIGVEDGQS PVRDVDNRNI EASPGTAENQ KSIHGSQGVQ  1080
NQLNGLPVER TLGAQDISMG PDNFLSQQLA YASKRSRSQL KSYIAHRAEE MYAYRSLPLG  1140
QDRRHNRYWQ FVASASSNDP GSGRIFIELN NGSWRLIDTE EAFDALLTSL DTRGIRESHL  1200
RLMLQKIEAS FKENVRKTAH CPNSAGPSKN RVKNEADMDS SPDCPSGFDS PGSTVCALNS  1260
DTAETSSSFR IELDRNEAEK RAALRRYQDF QKWMWKECFS SSTFCAMKYA KKRCRSLFDV  1320
CDFCLSCYYF EDSHCAFCHQ TFSAFYANFN FSEHVIQCKE KRKLEPWDSH IPCTSLPLAR  1380
RLLKALIAHV EVSIPPEALQ SFWTEDRRRT WGGKLNASSS TEELLQILTL LETAVKRDFL  1440
SSNFAATEEL LGTGKQSEAF VPDFLDSGSV PLLPWIPHTT AAVALRLHEM DSSITHIQLE  1500
KAEPNGDKEV KEYLKLPMRL APLKESEHTE VGHNEYIREE NNTHLKSARN SFRRGRGGRE  1560
QGRGKKWQRK VNNSKSGASR QKGSGNLSQG FRPVGKRTQG QGSARGRRTV RKRRTKDRAV  1620
EGTPLGRMTD VRSSPESGGE SPRNLGEEWD DEKIDMIQMK GDEQGEGYEQ AEALESEDDD  1680
QAVGYEQGNW ETGFDGTSSG WHEGLLEASD EDMDASEDDN NGIEEVRDED SEGDVDMSDA  1740
SDEIQNKITN DDGSDSAVSD DYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	89	RRLKDKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein