PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 276aa    MW: 31309.5 Da    PI: 6.5878
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.72.2e-34992452131
                TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaess 78 
                        +++k rhsk++T++g+RdRR Rlsa++a++f+d+qd+LG+d++sk+i+WL+++ak+ai +l +                             
  Pd.00g1152420.m01  99 TARKERHSKVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSEPelpgkeydctninnsA------------ 178
                        789************************************************************96666666554432221............ PP

                TCP  79 sssasnsssg..............kaaksaakskksqksaa.salnlak.esrakarararertrekmr 131
                          ++ ++ +g                ++++ ++ +s k++   +++l+  +  ++a   a   t +km 
  Pd.00g1152420.m01 179 --QQTEQDIGeesmrqfqhhqrsyGGEPEKLNNVNSFKEPVlDHHQLSSmNYAEEALNSASSLTDSKME 245
                        ..2222222222222222111122222222222222222220222222222335555556666666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MLQQRGSKNE DQDQPEDVQE EEQQSQKRLI GQYQHVQEPP NYGPLNGKML NTHIAKSSRK  60
SCYSMSSSSS HLASEQAEIN NARYGKIVKV HGGHIVRSTA RKERHSKVYT SKGPRDRRFR  120
LSAPTAIQFY DVQDRLGYDR PSKAIDWLIE KAKAAIEALS EPELPGKEYD CTNINNSAQQ  180
TEQDIGEESM RQFQHHQRSY GGEPEKLNNV NSFKEPVLDH HQLSSMNYAE EALNSASSLT  240
DSKMEVAWFQ SLMAWNYNAG DGGEGCPFNS SHVYLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.13e-39TCP family protein