PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1152200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 283aa    MW: 30439.5 Da    PI: 9.1078
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1152200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.66.9e-1196142354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++h+e+ErrRR+riN  +++Lr l+P       +K++Ka+ L  ++  +k+L
  Pd.00g1152200.m01  96 KNHSEAERRRRERINAHLSTLRGLVPCT-----EKMDKAALLATVISQVKEL 142
                        58*************************8.....7********9999888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEGMTKPTRS VTATTTATII NTLLSNKAAL VHRSEYSSLF DPFTHGSSGF GGALRGGGSV  60
LPHSLVLDSE KGELVKAPAR VGKKGVSEAK ALAALKNHSE AERRRRERIN AHLSTLRGLV  120
PCTEKMDKAA LLATVISQVK ELKKDALESS KGFLIPVDAD EVQVEPYDTG AGDGTISVRA  180
SVCCEYRSEL LSDLREALDS LHLQMVKADI ATLGNRVKNV FVFTKERSND ADADAFQLLA  240
SSVHQALSSV LDKASASPEY SPRTTLLSKR RRVSYFDTSS SSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107ERRRRE
2269273KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.13e-35bHLH family protein