PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1150710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 859aa MW: 98102 Da PI: 7.3627

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1150710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105	4e-33	182	239	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers edp++v++tYeg+Hnh+ Pd.00g1150710.m01 182 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCGVKKRVERSFEDPSTVITTYEGQHNHP 239 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 859 aa Download sequence
MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHNQNLQGIE VPSYMNNTSF SECLKGPMDY 60 NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS 120 SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKQREPRF AFMTKSEVDH 180 LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL 240 PATLRGNGAA SSAFFPHAAA AFNYEPITGS AVKSATNHAD DLYKDRAVED LPYGRSFYGL 300 SALIGLCGLL CRSYVPCHNI IDRSNMFGAD LMDREMVDAG PVTPGQVSFL LGIIPVFVTW 360 IYSEYLEYKK SSSHPKVHSD TNLVELGEET IKEDDRAVLL EGGLSRSAST KFNSSSIKIN 420 LIRFLTMDDS FLLENRATLR VMSELGAILF YFYICDRTNI LGASTKNYNR DLFLFLYLLL 480 IIVSAVTSLK KHTDRSAFSG KSILYLNRHQ TEEWKGWMQV LFLMYHYFAA SEIYNAIRVF 540 IAAYVWMTGF GNFSYYYIRK DFSLARFAQM MWRLNFFVAF CCIVLNNDYM LYYICPMHTL 600 YTLMVYGALG IFSKYNEIRS AMAVKILGCF LAVILIWEIP GVFEIFFRPL SFLLGYTDPA 660 KPDLPRLHEW HFRSGLDRYI WIIGMIYAYY HPNVEKWMDK LEESDTKRRV SIKAGIFSSS 720 VFVGYLWYEY IYKLDKVSYN KLHPYTSWIP ITVYICLRNF TQQLRGVSLT LFAWLGKITL 780 ETYISQFHIW LRSNTPNGQP KWLLSLIPEY PLLNFMLTTA IYVLVSHRLF ELTNTLKTVY 840 LIDQLNEEDP KEGYTDVSC

Sequence ? help Back to Top

Protein Sequence Length: 859 aa Download sequence

MSDHEHKDLY YHDLFQYEDH EHLNGGMISI NHNQNLQGIE VPSYMNNTSF SECLKGPMDY  60
NTLATAFGLA SSTSDEVIFS SANEGDQKPA EHIRYSGGGG DGDGGGGETP LTPNSSVSSS  120
SAEAGAEEDS GKSKKDRQPK GSSEDGGDSS KKVMSKAKKK GEKKQREPRF AFMTKSEVDH  180
LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCGVKKRVER SFEDPSTVIT TYEGQHNHPL  240
PATLRGNGAA SSAFFPHAAA AFNYEPITGS AVKSATNHAD DLYKDRAVED LPYGRSFYGL  300
SALIGLCGLL CRSYVPCHNI IDRSNMFGAD LMDREMVDAG PVTPGQVSFL LGIIPVFVTW  360
IYSEYLEYKK SSSHPKVHSD TNLVELGEET IKEDDRAVLL EGGLSRSAST KFNSSSIKIN  420
LIRFLTMDDS FLLENRATLR VMSELGAILF YFYICDRTNI LGASTKNYNR DLFLFLYLLL  480
IIVSAVTSLK KHTDRSAFSG KSILYLNRHQ TEEWKGWMQV LFLMYHYFAA SEIYNAIRVF  540
IAAYVWMTGF GNFSYYYIRK DFSLARFAQM MWRLNFFVAF CCIVLNNDYM LYYICPMHTL  600
YTLMVYGALG IFSKYNEIRS AMAVKILGCF LAVILIWEIP GVFEIFFRPL SFLLGYTDPA  660
KPDLPRLHEW HFRSGLDRYI WIIGMIYAYY HPNVEKWMDK LEESDTKRRV SIKAGIFSSS  720
VFVGYLWYEY IYKLDKVSYN KLHPYTSWIP ITVYICLRNF TQQLRGVSLT LFAWLGKITL  780
ETYISQFHIW LRSNTPNGQP KWLLSLIPEY PLLNFMLTTA IYVLVSHRLF ELTNTLKTVY  840
LIDQLNEEDP KEGYTDVSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	3e-47	WRKY family protein