PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1147980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 339aa MW: 38408.4 Da PI: 8.1095

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1147980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.5	5.3e-32	67	120	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ+YR+ Pd.00g1147980.m01 67 PRLRWTPDLHLRFIHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRS 120 8****************************************************7 PP
2	Myb_DNA-binding	53.3	6.3e-17	68	119	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++++av++lGg t+k++ + m+ kg++ ++ks++q+y+ Pd.00g1147980.m01 68 RLRWTPDLHLRFIHAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQMYR 119 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MEGDSDSSKT SPSREQNEGG SESGENYDDI EESGKPKNNG GSSSNSTVEE SDQRKASVRP 60 YVRSKMPRLR WTPDLHLRFI HAVERLGGQE RATPKLVLQL MNIKGLSIAH VKSHLQMYRS 120 KKIDDAGQVL ADHQGHLVEC GDKNIYNLSQ LPMLQGYNRS HSTSFRYGDA KSWTAYENPR 180 YPRSTGFQGN WSSSSAYNYL TSCSFGEQSS WIARTLKQEC QLYNIRESLQ AQHQHQARLS 240 QQLIDLNPTS THVQVQPKPK ELITSFNNSN NLELTSKKNE DHQSKSLKRK ASDYEDLDLD 300 LSLRLTSRNK NEDDIHEVDS SLSLSLYSPP SSKLSRLKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	8e-62	G2-like family protein