PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1147920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 145aa    MW: 16220.3 Da    PI: 9.9783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1147920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-105494954
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        r RR+ri ++f  L++l+P       +K++ +++Le+A++Y+k L
  Pd.00g1147920.m01 54 ARERRHRISDRFKILQSLVPGG-----TKMDTVSMLEEAIHYVKFL 94
                       699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MDYFSATNNS SSDGSNSNSS SATKHNGTGE KIKGGVKSKS KGVRLSTDPQ SVAARERRHR  60
ISDRFKILQS LVPGGTKMDT VSMLEEAIHY VKFLKAQIWL HQNMINFNNF VQPPSPSMNI  120
PLPDPNYFQG QEAMPNIEAY MKYYS