PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1147030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 74aa    MW: 8530.15 Da    PI: 4.1953
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1147030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.93.2e-102567145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       ++ ++++E+ l+ + +++ G + W++Ia +++ gR+++++  +w 
  Pd.00g1147030.m01 25 KLHFSEDEETLITRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWT 67
                       5789******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADLDHSTSD DNSVDSREES SQDSKLHFSE DEETLITRMF NLVGERWSLI AGRIPGRSAE  60
EIEKYWTSRY STSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.15e-18MYB_related family protein