PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1146730.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 426aa MW: 45710 Da PI: 6.0389

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1146730.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l Pd.00g1146730.m01 34 KGPWTAAEDGILMEYVKKHGEGNWNAVQKNSGLARCGKSCRLRWANHL 81 79******************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MMLNSSGVDG VHEAEAAAQR GGSHHNHQQR GLKKGPWTAA EDGILMEYVK KHGEGNWNAV 60 QKNSGLARCG KSCRLRWANH LRPNLKKGSL SPDEERLIIE LHAKFGNKWA RMASQPRKSS 120 TYSLAQLSLY DHITTFSSSS DHHNNHTNNY HRNAASLFSN TITQFNGNGG GFAMPFGSSS 180 SSALFNQSHN IPNPNPFGSS SATPPPLHHQ YNSHGGFGGY NNLSLSSIIM GPPSYDSTAG 240 LVAGSNAELP SNQTPPSIQC DEAPMGASGN TNEDDRYEIA PVPSQGNSGL LDDVLAEAHN 300 ISNKRLKMQI ESTLKNSGDN SAENQRDDSS SPSSIDMKQS EDPLDEMDDD LLSLLNFSST 360 VPAVSETSWY LAECMSNSGS SASENVGLDT QQNAPLTLTS VKTTAAAPEV QSTLGACYWN 420 NMPGIC

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MMLNSSGVDG VHEAEAAAQR GGSHHNHQQR GLKKGPWTAA EDGILMEYVK KHGEGNWNAV  60
QKNSGLARCG KSCRLRWANH LRPNLKKGSL SPDEERLIIE LHAKFGNKWA RMASQPRKSS  120
TYSLAQLSLY DHITTFSSSS DHHNNHTNNY HRNAASLFSN TITQFNGNGG GFAMPFGSSS  180
SSALFNQSHN IPNPNPFGSS SATPPPLHHQ YNSHGGFGGY NNLSLSSIIM GPPSYDSTAG  240
LVAGSNAELP SNQTPPSIQC DEAPMGASGN TNEDDRYEIA PVPSQGNSGL LDDVLAEAHN  300
ISNKRLKMQI ESTLKNSGDN SAENQRDDSS SPSSIDMKQS EDPLDEMDDD LLSLLNFSST  360
VPAVSETSWY LAECMSNSGS SASENVGLDT QQNAPLTLTS VKTTAAAPEV QSTLGACYWN  420
NMPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-50	MYB family protein