PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1146560.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 498aa    MW: 54318.5 Da    PI: 5.7158
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1146560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.6e-31236294259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Pd.00g1146560.m01 236 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 294
                        7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MDLHGPTDME FNVNTGLNLL LTNTSSDQSV VDDGISSNIE DKRAKSELAV LRAELERMNA  60
ENQRLRGMLN QVTTNYNALQ VHLLTLMQSQ KAEQNSSAAE GHGVFDGNNK MVVEEKKLIN  120
GNGSQVVVPR QFMDLGLAAN NADTDEPSQS SSEERSRERS GSLGENVKVA GHSDDQEKKE  180
FGRGIGREES PDQPSQSWAP NKVPRLNSPK EVDQTEATMR KARVSVRARS EAPMITDGCQ  240
WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR KQVQRCAEDR TILITTYEGN HNHPLPPAAM  300
AMASTTSSAA RMLLSGSMQS ADGLMDSNFL TRTILPCSSS MATISASAPF PTVTLDLTQS  360
PNPLQLQRPP GQFNIPFPNP SQNFTNGPVS LLPQIFGQAL YNQSKFSGLQ MSQDMERAQL  420
GHQQQPGHQE QQQNSLADTE ACSLKTDSAG QTSETPSAAG VNAMGQPAET ENANLMEETE  480
GLRGPWMNVP PREGNPKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-116WRKY family protein