PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g114530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 298aa    MW: 33100 Da    PI: 6.6095
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g114530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20108158256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         +GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g114530.m01 108 SNRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 158
                       689*****9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDGKFPKLET FIEKQLPSYF PRMASDIRSN LFGDPAIWCG SGSKSSLSPE SSSSSTEEFS  60
SSGSNLIDNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPR TSPPSLSSNR GVRQRHWGKW  120
VAEIRLPRNR TRVWLGTFDT AEEAAIAYDT AAYMLRGEHA HLNFPDLKHQ LKANALKGNT  180
AALLEAKLQA ISSSQAHQKA IMESKSSQLA SPNKHSADDH DDHKYSNLMI NSNFSQNPTR  240
KEWQYGLESK VGSDHEGVIE SKKSQQELVS ADVDAVQLSR MPSLDMDMIW DALLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-40ERF family protein