PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1143970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 334aa MW: 38004.4 Da PI: 5.1577

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1143970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.4	1.8e-08	37	107	8	79
trihelix 8 laLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 l+L++ +e + ++ + ++W+ +s+++++ g+ r+ q + kw+ l +yk ik++e+ + s + Pd.00g1143970.m01 37 LLLVNEIAAVEADCLKALSSFQKWKIISQNCSALGVPRTLDQYRRKWDALFLEYKSIKQWESAS-RGGASYW 107 5666666667777777778889***************************************985.4444455 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MKVQRSQSEL DRSQCGSSSR RSTRSQVAPD WNPTDELLLV NEIAAVEADC LKALSSFQKW 60 KIISQNCSAL GVPRTLDQYR RKWDALFLEY KSIKQWESAS RGGASYWVLE IGRRKQKGLP 120 GNFDNELFRA IDNLVRVRGN QSDTDPDSDP EAEIDAEADV PDVVAEPESK RRRRRSTHQK 180 SCPIENSFRR CKVDRPEETH VEEKPEETHA EEKPQETQAE EKPFGTCLEV ILQKSLAEEK 240 SQKSCAKKHK NSQIKEKAIS IEEQEQIAVM QLHENVELIQ AIVNENADHE AANVKSTGDP 300 QTDLVRRQGE QVIACLGDIV KTLDQLRQLV QECE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	175	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-62	Trihelix family protein