PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1142190.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 337aa    MW: 37752.1 Da    PI: 7.5401
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1142190.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.27.5e-05234272644
                        S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHH CS
           Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqV 44 
                        +++k  +e+Le++++k++ p+ +++  + + ++L+ ++V
  Pd.00g1142190.m01 234 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRV 272
                        5678899****************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAFASALNTP KGLHCLTLPS SRNERPPTNL ILPRQFPARF SSTLALARRR NQRTEVASSK  60
PKINKKSLAK KEVKEEEEEE EEDVDEDAID ALFRLLEEDL KNDDASLDDE DLTEEELAKL  120
EQELKTWQLR RLAAALKVGR RKTSIKILAA ELCLDRPVVL ELLRNPPPSL LMMCAALPDE  180
PAPTISVSQT MPIETDVETT VETVVETTTE SSEVETTVNK PIHVMQHKFS AQKRLKKAHV  240
ETLESVYRKT KRPTNAMISS IVHVTNLPRK RVVKCKPICK AGRKLLASIH IAANVTWSKG  300
SYVEIAYTRD VNHSNGTKGM NNDFEKYAGN SGETTSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-48HB-other family protein