PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1140660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 818aa MW: 88907.6 Da PI: 7.1309

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1140660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111	1.7e-34	85	155	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai ++tgt++ +a ++ Pd.00g1140660.m01 85 AAKRSSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIMQATGTGTVPAIAV 155 5799***********************************************************77777433 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MEPNQRQSLE ESNELEQHSN SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE 60 LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE 120 LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR 180 KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GDGGGAHGLV PMWQVGATGA AGPFFMFPNN 240 GAMNPNQPQL WAVPAADAAT PIFNFQARPI SNFLSAFQPG VHVVGGDVQL QASSGSLSSG 300 ATSGLAFASS WSREVVLHVC SGFSCFKQIH AQIVTSGLAC NDLVANNVVG FLGKNVNSLD 360 YACDFLKQVD WRVSSFPFNT LISGYANGDK TGAAVLVYRR IVRDGFVPDM YTVPAVLKSC 420 VKFLGKGEGR QVHGVVVKMG FQCDVYAQNS LVHFYSVCGD CGGAIRVFDE MPVKDVVSWT 480 GLISGHVKAG LFDEAISLFF RMDVKPNVAT FVSVLVACGR MGYLRVGKGI HGLIFKRSLA 540 CASLGALDYG RWVHEYIDRR GIKWDIHIGT SLIDMYAKCG CIKMALQTFN ELPCGNVSTW 600 NALLGGLAMH GNGHEALQNF EEMTKSGTRP NAVTFLAILT ACCHSGLVDE SRGYFYQMIS 660 QPYNLSPRLE HYGCMVDLLC RAGLVDEARE LINTMPMQPD VLIWGALLSA YKAKGDVELS 720 QEILDRLLQL KLHDSGVYVL LSNIYATNER WADVTRVRRL MKKKGIQKSP GSSVIEVDGK 780 AHEFLVGDTS HPQHEDIHVL LNILANQVYL EGIFPIHS

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MEPNQRQSLE ESNELEQHSN SSSNDNTTSA SDPSVADPPE KIFPLTAPTM KEELTDTVQE  60
LDEGSLPMGL IQVPVPTSSE KQVVAAKRSS KDRHTKVEGR GRRIRMPATC AARIFQLTRE  120
LGHKSDGETI RWLLEHAEPA IMQATGTGTV PAIAVSVGGT LKIPTTSPAR PNGEITEIPR  180
KRRKRGSNSE FVDVHEQSSV SSGLAPMSYG GDGGGAHGLV PMWQVGATGA AGPFFMFPNN  240
GAMNPNQPQL WAVPAADAAT PIFNFQARPI SNFLSAFQPG VHVVGGDVQL QASSGSLSSG  300
ATSGLAFASS WSREVVLHVC SGFSCFKQIH AQIVTSGLAC NDLVANNVVG FLGKNVNSLD  360
YACDFLKQVD WRVSSFPFNT LISGYANGDK TGAAVLVYRR IVRDGFVPDM YTVPAVLKSC  420
VKFLGKGEGR QVHGVVVKMG FQCDVYAQNS LVHFYSVCGD CGGAIRVFDE MPVKDVVSWT  480
GLISGHVKAG LFDEAISLFF RMDVKPNVAT FVSVLVACGR MGYLRVGKGI HGLIFKRSLA  540
CASLGALDYG RWVHEYIDRR GIKWDIHIGT SLIDMYAKCG CIKMALQTFN ELPCGNVSTW  600
NALLGGLAMH GNGHEALQNF EEMTKSGTRP NAVTFLAILT ACCHSGLVDE SRGYFYQMIS  660
QPYNLSPRLE HYGCMVDLLC RAGLVDEARE LINTMPMQPD VLIWGALLSA YKAKGDVELS  720
QEILDRLLQL KLHDSGVYVL LSNIYATNER WADVTRVRRL MKKKGIQKSP GSSVIEVDGK  780
AHEFLVGDTS HPQHEDIHVL LNILANQVYL EGIFPIHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-58	TCP family protein