PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1138240.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 348aa    MW: 38261.5 Da    PI: 10.0982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1138240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.72.8e-15126172455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         hn+ Er+RRdriN+++  L++l+P+a      K +Ka++L ++++Y+ +Lq
  Pd.00g1138240.m01 126 VHNQSERKRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVIKYLEQLQ 172
                        6*************************9.....7******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MQQNHPNTGR LVPLSNYDIR ELKLENGQLA MHGLGGLLPT SQAKHTWGRA GDTLESVVHQ  60
ATHHKREPNL IHNGQTPANI SSMVASSGRT WTDEGGQENQ DDGQETTKDG ESGRSRSTRP  120
KRAAAVHNQS ERKRRDRINQ KMKALQRLVP NASKTDKASM LDEVIKYLEQ LQAQVQMMSS  180
VRNMPHMNMN MNMMMPLGMQ QQQHLHQMSF LAHMGMGGNV GPLGLGMGMG IGIIDMSNNM  240
ARMAAHAHHQ SIRLPIPHPT PVVAAAPTFI PPFMVPPLMP RHPPSQAKPD PACTNASDPL  300
PDPYGALLAQ QSMNMDLFNR MAALYHQQVN HTTAATSSPS QSNHVQGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-37bHLH family protein