PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1137350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 472aa MW: 53214.1 Da PI: 7.9871

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1137350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	298	344	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g1137350.m01 298 KHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 344 699*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEEIILSSSP PQLFQENSVS FQQRLQFIVQ NRPEWWVYSI FWQASKDSND EVALSWAGGH 60 FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH GVGDVTDSEW 120 FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIKSLV 180 CIATPCGVLE LASLDVIKED LGVVHLSKSL FLSDNNRVSK QDSRARDGNA LVPPLESGML 240 SGGQKDLTKQ GDTKEAAPIN IGGSSADSAD NFTSDNTEST RLKKIGRSSS NHAPQLLKHV 300 EAERQRREKL NHRFYVLRSV VPNVSKMDRS SLLADAVAYI NQLKAKIEEL EDKIQSQPQN 360 PKRGNVSNAD HHYSQSTSPI VDFHHSTNRA AAALEVDVKI LGSEAVIRVQ CPDQEYPYAK 420 LMNALKSLRL QVYHASISNV KDLMIQNIVV RVPYGFTSDE AMRMGIIKKW YN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEEIILSSSP PQLFQENSVS FQQRLQFIVQ NRPEWWVYSI FWQASKDSND EVALSWAGGH  60
FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH GVGDVTDSEW  120
FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIKSLV  180
CIATPCGVLE LASLDVIKED LGVVHLSKSL FLSDNNRVSK QDSRARDGNA LVPPLESGML  240
SGGQKDLTKQ GDTKEAAPIN IGGSSADSAD NFTSDNTEST RLKKIGRSSS NHAPQLLKHV  300
EAERQRREKL NHRFYVLRSV VPNVSKMDRS SLLADAVAYI NQLKAKIEEL EDKIQSQPQN  360
PKRGNVSNAD HHYSQSTSPI VDFHHSTNRA AAALEVDVKI LGSEAVIRVQ CPDQEYPYAK  420
LMNALKSLRL QVYHASISNV KDLMIQNIVV RVPYGFTSDE AMRMGIIKKW YN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-59	bHLH family protein