PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1137310.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 450aa    MW: 50481.8 Da    PI: 7.3582
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1137310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12303348454
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +h e+Er+RR+++N++f  Lr+++P+       K++Ka+ L  Av YI++L
  Pd.00g1137310.m01 303 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDKASLLSDAVVYINKL 348
                        799***********************6.....5***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MEEIMSSCSP NFGQENSATL QQRLQFIVQN RPEWWVYSIF WQASKDSNGQ VALSWAGGHF  60
RSSRDLASKR SNRLVHNYQP KSGFISSERK KVVNREVEAL FHEDMDLDGG DVTDSEWFYF  120
YTVSLTQSFG ACHGTGNILG RAFCSGGFVW LAGDHELQFY ECERVKEARM HGIQTLVCIQ  180
TSCGVLELAS LDVIKEDWGL VEVSKSLFGS ENSRVSKPQS SREGHVLVPL LESGMFSAGP  240
QKEWTAQGGT KERFALNIGG SSSDSGPSDS VGNFTTENAE NNGRLKKRGR SSNHGTDKES  300
PINHVEAERQ RREKLNHRFY ALRSVVPNVS KMDKASLLSD AVVYINKLKA RVEELEAKIQ  360
QQPQKPKLAG AIEVDVKIVG SEAMIRVQSP DQNYPYARLM NALKDLELQV YHASISSVKE  420
MMLQDVVARV PHGFTSEEAM RTAIIKRWYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1285291LKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.14e-64bHLH family protein