PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1136680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 336aa    MW: 35883.5 Da    PI: 6.3457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1136680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-184797256
                AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                       ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Pd.00g1136680.m01 47 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 97
                       689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAEYTEDNLP PMQHRVGMPK DQTVSIRDKQ KDGVRGRRKS STRGHHRFVG VRQRPSGRWV  60
AEIKDSLQKV RLWLGTFDTA EDAARAYDDA ARALRGANAR TNFELPQSTN GSGHANGGAG  120
VAENVEPFSF EAVCGNGAEA DGLLGALRAK LLDGKGCVVP QPQGNNGGAK MEPFPIVPRG  180
VVGFVNPNPP PSSSGSAKED PIVLDVNGHD HRWGHHQAQP SHTASNQSMA WSNESPALAY  240
DQVPNWSTWS TQTDSFTEQC PMELPLQITS LAGDGKVTAV SSQQLSQIDG SAILGSSASG  300
AWSSDQQQFL HCDNSWAAGG ANASWDPLFY ASSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-15ERF family protein